diff --git a/examples/v1/train_full/train_full_chunk_loss.yaml b/examples/v1/train_full/train_full_chunk_loss.yaml
new file mode 100644
index 000000000..7b001fe66
--- /dev/null
+++ b/examples/v1/train_full/train_full_chunk_loss.yaml
@@ -0,0 +1,27 @@
+model: Qwen/Qwen3-0.6B
+trust_remote_code: true
+model_class: llm
+
+kernel_config:
+  name: auto
+
+# FSDP Config
+dist_config:
+  name: fsdp2
+  dcp_path: null
+
+### data
+train_dataset: data/v1_sft_demo.yaml
+
+### training
+output_dir: outputs/test_chunk_loss
+micro_batch_size: 1
+cutoff_len: 2048
+# Maximum flattened token rows per logits/CE chunk; this is not the sequence length.
+chunk_loss_size: 256
+learning_rate: 1.0e-4
+max_steps: 10
+
+### sample
+sample_backend: hf
+max_new_tokens: 128
diff --git a/examples/v1/train_full/train_full_multimodal_ulysses_cp.yaml b/examples/v1/train_full/train_full_multimodal_ulysses_cp.yaml
new file mode 100644
index 000000000..98d5b015b
--- /dev/null
+++ b/examples/v1/train_full/train_full_multimodal_ulysses_cp.yaml
@@ -0,0 +1,25 @@
+model: Qwen/Qwen3.5-0.8B
+trust_remote_code: true
+model_class: llm
+
+flash_attn: flash_attention_2
+
+# FSDP Config
+dist_config:
+  name: fsdp2
+  dcp_path: null
+
+cp_mode: ulysses
+cp_size: 2
+
+### data
+train_dataset: data/v1_multimodal_demo.yaml
+
+### training
+output_dir: outputs/test_multimodal_ulysses_cp
+micro_batch_size: 1
+batching_strategy: normal
+cutoff_len: 2048
+learning_rate: 1.0e-4
+bf16: false
+max_steps: 10
diff --git a/src/llamafactory/v1/config/training_args.py b/src/llamafactory/v1/config/training_args.py
index f86f80a6d..5c01d93e0 100644
--- a/src/llamafactory/v1/config/training_args.py
+++ b/src/llamafactory/v1/config/training_args.py
@@ -144,6 +144,10 @@ class TrainingArguments:
         default=1,
         metadata={"help": "Log metrics every N optimizer steps."},
     )
+    chunk_loss_size: int | None = field(
+        default=None,
+        metadata={"help": "Maximum flattened token rows per Chunk Loss chunk. None disables Chunk Loss."},
+    )
     pref_loss: Literal["sigmoid", "orpo", "simpo"] = field(
         default="sigmoid",
         metadata={"help": "The type of DPO loss to use."},
@@ -173,6 +177,8 @@ class TrainingArguments:
         self.dist_config = get_plugin_config(self.dist_config)
         self.optim_config = get_plugin_config(self.optim_config)
         self.lr_scheduler_config = get_plugin_config(self.lr_scheduler_config)
+        if self.chunk_loss_size is not None and self.chunk_loss_size <= 0:
+            raise ValueError("`chunk_loss_size` must be positive.")
         try:
             from ..plugins.model_plugins.deepspeed_utils import register_deepspeed_dist_config
 
diff --git a/src/llamafactory/v1/core/base_trainer.py b/src/llamafactory/v1/core/base_trainer.py
index 06aa55670..e04e8a9b2 100644
--- a/src/llamafactory/v1/core/base_trainer.py
+++ b/src/llamafactory/v1/core/base_trainer.py
@@ -239,7 +239,12 @@ class BaseTrainer:
 
     @abstractmethod
     def compute_loss(self, batch: BatchInput) -> Tensor:
-        """Compute the scalar loss."""
+        """Compute the scalar loss.
+
+        Subclasses must handle sequence-parallel layout and loss aggregation when
+        `self.cp_size > 1`, or reject context parallelism during initialization.
+        The shared training loop does not dispatch sequence-parallel loss.
+        """
         ...
 
     def fit(self) -> None:
@@ -265,14 +270,7 @@ class BaseTrainer:
                 step_valid_tokens = DistributedInterface().all_reduce(step_valid_tokens, op=ReduceOp.SUM)
                 num_micro = len(micro_batches)
                 for i, micro_batch in enumerate(micro_batches):
-                    if self.args.cp_size > 1:
-                        from ..plugins.model_plugins.parallelization.sequence_parallel import (
-                            SequenceParallelLossPlugin,
-                        )
-
-                        loss = SequenceParallelLossPlugin("sequence_parallel_loss")(self.model, micro_batch)
-                    else:
-                        loss = self.compute_loss(micro_batch)
+                    loss = self.compute_loss(micro_batch)
                     mini_step_valid_tokens = compute_valid_tokens([micro_batch])
                     # fsdp uses mean reduction so we need to scale the loss by dp_size
                     loss = loss * mini_step_valid_tokens * self.dp_size / (step_valid_tokens + 1e-6)
diff --git a/src/llamafactory/v1/plugins/model_plugins/chunk_loss.py b/src/llamafactory/v1/plugins/model_plugins/chunk_loss.py
new file mode 100644
index 000000000..8a4dd01aa
--- /dev/null
+++ b/src/llamafactory/v1/plugins/model_plugins/chunk_loss.py
@@ -0,0 +1,218 @@
+# Copyright 2026 the LlamaFactory team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+"""Chunked linear cross-entropy for SFT."""
+
+from __future__ import annotations
+
+from dataclasses import dataclass
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+from torch import Tensor
+
+from ...utils.constants import IGNORE_INDEX
+from ...utils.plugin import BasePlugin
+from ...utils.types import BatchInput, HFModel, ModelOutput
+
+
+class LossPlugin(BasePlugin):
+    def __call__(self, model: HFModel, chunk_size: int) -> ChunkLoss:
+        return super().__call__(model, chunk_size)
+
+
+class _ChunkedLinearCrossEntropy(torch.autograd.Function):
+    @staticmethod
+    def forward(
+        ctx,
+        hidden_states: Tensor,
+        head_weight: Tensor,
+        head_bias: Tensor | None,
+        labels: Tensor,
+        loss_weights: Tensor,
+        chunk_size: int,
+    ) -> Tensor:
+        needs_hidden_grad, needs_weight_grad, needs_bias_grad = ctx.needs_input_grad[:3]
+        hidden_states_flat = hidden_states.reshape(-1, hidden_states.size(-1))
+        labels_flat = labels.reshape(-1)
+        loss_weights_flat = loss_weights.reshape(-1)
+
+        loss = torch.zeros((), device=hidden_states.device, dtype=torch.float32)
+        grad_hidden = torch.empty_like(hidden_states_flat) if needs_hidden_grad else None
+        # Avoid repeated BF16 rounding when summing head gradients across chunks.
+        grad_weight = torch.zeros_like(head_weight, dtype=torch.float32) if needs_weight_grad else None
+        grad_bias = (
+            torch.zeros_like(head_bias, dtype=torch.float32) if head_bias is not None and needs_bias_grad else None
+        )
+
+        for start in range(0, hidden_states_flat.size(0), chunk_size):
+            end = start + chunk_size
+            with torch.enable_grad():
+                hidden_arg = hidden_states_flat[start:end].detach().requires_grad_(needs_hidden_grad)
+                weight_arg = head_weight.detach().requires_grad_(needs_weight_grad)
+                bias_arg = head_bias.detach().requires_grad_(needs_bias_grad) if head_bias is not None else None
+                logits = F.linear(hidden_arg, weight_arg, bias_arg).float()
+                token_loss = F.cross_entropy(
+                    logits,
+                    labels_flat[start:end],
+                    reduction="none",
+                    ignore_index=IGNORE_INDEX,
+                )
+                chunk_loss = (token_loss * loss_weights_flat[start:end]).sum()
+                grad_targets = [
+                    tensor
+                    for tensor, needed in (
+                        (hidden_arg, needs_hidden_grad),
+                        (weight_arg, needs_weight_grad),
+                        (bias_arg, needs_bias_grad),
+                    )
+                    if tensor is not None and needed
+                ]
+                chunk_grads = torch.autograd.grad(chunk_loss, grad_targets) if grad_targets else ()
+
+            loss.add_(chunk_loss.detach())
+            grad_index = 0
+            if grad_hidden is not None:
+                grad_hidden[start:end].copy_(chunk_grads[grad_index])
+                grad_index += 1
+            if grad_weight is not None:
+                grad_weight.add_(chunk_grads[grad_index])
+                grad_index += 1
+            if grad_bias is not None:
+                grad_bias.add_(chunk_grads[grad_index])
+
+        ctx.save_for_backward(
+            grad_hidden.reshape_as(hidden_states) if grad_hidden is not None else None,
+            grad_weight.to(head_weight.dtype) if grad_weight is not None else None,
+            grad_bias.to(head_bias.dtype) if grad_bias is not None else None,
+        )
+        return loss
+
+    @staticmethod
+    def backward(ctx, grad_output: Tensor):
+        grad_hidden, grad_weight, grad_bias = ctx.saved_tensors
+        return (
+            grad_hidden * grad_output if grad_hidden is not None else None,
+            grad_weight * grad_output if grad_weight is not None else None,
+            grad_bias * grad_output if grad_bias is not None else None,
+            None,
+            None,
+            None,
+        )
+
+
+@dataclass
+class _ChunkLossState:
+    labels: Tensor
+    loss_weights: Tensor
+    loss: Tensor | None = None
+    loss_version: int = 0
+
+
+@LossPlugin("chunk_loss").register()
+class ChunkLoss:
+    """Install Chunk Loss before distributed wrapping.
+
+    The model must call a plain Linear output head once and return its output
+    directly as logits, without subsequent transformations. Other forwards keep
+    their normal logits, including forwards of independently installed models.
+    """
+
+    def __init__(self, model: HFModel, chunk_size: int) -> None:
+        self._output_head = model.get_output_embeddings()
+        if type(self._output_head) is not nn.Linear:
+            raise TypeError("Chunk Loss requires `get_output_embeddings()` to return a plain `torch.nn.Linear`.")
+
+        self.chunk_size = chunk_size
+        self._active_state: _ChunkLossState | None = None
+        self._original_forward = self._output_head.forward
+        self._output_head.forward = self._head_forward
+        model.register_forward_hook(self._check_model_output)
+
+    def __call__(
+        self,
+        model: HFModel,
+        model_inputs: dict[str, Tensor],
+        labels: Tensor,
+        loss_weights: Tensor,
+    ) -> Tensor:
+        """Return a local weighted loss sum for already shifted targets."""
+        state = _ChunkLossState(labels=labels, loss_weights=loss_weights)
+        self._active_state = state
+        try:
+            outputs: ModelOutput = model(**model_inputs)
+        finally:
+            self._active_state = None
+
+        if state.loss is None:
+            raise RuntimeError("Chunk Loss did not reach the model output head.")
+        # Use the outer output so distributed wrappers retain their backward hooks.
+        return outputs.logits
+
+    def compute_loss(
+        self,
+        model: HFModel,
+        batch: BatchInput,
+        *,
+        device: torch.device,
+        uses_mrope: bool,
+    ) -> Tensor:
+        """Prepare an unsharded SFT batch and compute its weighted mean Chunk Loss."""
+        model_inputs = {
+            key: value.to(device, non_blocking=True) for key, value in batch.items() if isinstance(value, torch.Tensor)
+        }
+        labels = model_inputs.pop("labels")
+        loss_weights = model_inputs.pop("loss_weights")
+        if uses_mrope:
+            model_inputs.pop("position_ids", None)
+
+        # Align each hidden state with its next-token target, as in the CP batch preparation.
+        labels = F.pad(labels[..., 1:].contiguous(), (0, 1), value=IGNORE_INDEX)
+        loss_weights = F.pad(loss_weights[..., 1:], (0, 1), value=0.0)
+        numerator = self(model, model_inputs, labels, loss_weights)
+        return numerator / (loss_weights.sum() + 1e-6)
+
+    def _head_forward(self, hidden_states: Tensor) -> Tensor:
+        state = self._active_state
+        if state is None:
+            return self._original_forward(hidden_states)
+        if state.loss is not None:
+            raise RuntimeError("Chunk Loss expects one output-head call per model forward.")
+        if hidden_states.shape[:-1] != state.labels.shape or state.labels.shape != state.loss_weights.shape:
+            raise ValueError(
+                "Chunk Loss hidden states, labels, and loss weights must share the same token layout: "
+                f"hidden_states={tuple(hidden_states.shape)}, labels={tuple(state.labels.shape)}, "
+                f"loss_weights={tuple(state.loss_weights.shape)}."
+            )
+
+        state.loss = _ChunkedLinearCrossEntropy.apply(
+            hidden_states,
+            self._output_head.weight,
+            self._output_head.bias,
+            state.labels,
+            state.loss_weights,
+            self.chunk_size,
+        )
+        state.loss_version = state.loss._version
+        return state.loss
+
+    def _check_model_output(self, _model, _args, outputs: ModelOutput) -> None:
+        state = self._active_state
+        if state is None or state.loss is None:
+            return
+        # Validate before DDP and other wrappers can replace the output tensor.
+        # The version counter also catches in-place logits transformations.
+        if outputs.logits is not state.loss or state.loss._version != state.loss_version:
+            raise NotImplementedError("Chunk Loss does not support transformations after the model output head.")
diff --git a/src/llamafactory/v1/plugins/model_plugins/parallelization/batch.py b/src/llamafactory/v1/plugins/model_plugins/parallelization/batch.py
new file mode 100644
index 000000000..745d2bffe
--- /dev/null
+++ b/src/llamafactory/v1/plugins/model_plugins/parallelization/batch.py
@@ -0,0 +1,108 @@
+# Copyright 2026 the LlamaFactory team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+"""Explicit batch ownership and sequence layout helpers for sequence parallelism."""
+
+from dataclasses import dataclass
+
+import torch
+import torch.nn.functional as F
+
+from ....utils.constants import IGNORE_INDEX
+from ....utils.types import BatchInput, Tensor
+
+
+# These tensors belong to a multimodal encoder tower and remain replicated
+# until the outer model has fused them into the global language sequence.
+MULTIMODAL_ENCODER_INPUT_KEYS = frozenset(
+    {
+        "pixel_values",
+        "image_grid_thw",
+        "pixel_values_videos",
+        "video_grid_thw",
+        "second_per_grid_ts",
+        "video_second_per_grid",
+        "input_features",
+        "feature_attention_mask",
+    }
+)
+
+# Only tensors in this list are padded along the global language sequence.
+# They remain full while the outer model performs multimodal fusion and mRoPE setup.
+SEQUENCE_PARALLEL_INPUT_KEYS = frozenset(
+    {
+        "input_ids",
+        "attention_mask",
+        "position_ids",
+        "mm_token_type_ids",
+    }
+)
+
+
+@dataclass(frozen=True)
+class PreparedSequenceParallelBatch:
+    """Full model inputs plus CP-local next-token targets."""
+
+    model_inputs: dict[str, Tensor]
+    local_shift_labels: Tensor
+    local_shift_loss_weights: Tensor
+    global_loss_weight_sum: Tensor
+
+
+def split_sequence_tensor(tensor: Tensor, device_mesh, dim: int = -1) -> Tensor:
+    """Take the contiguous sequence shard owned by the local CP rank."""
+    cp_mesh = device_mesh["cp"]
+    cp_size = cp_mesh.size()
+    sequence_length = tensor.shape[dim]
+    if sequence_length == 0 or sequence_length % cp_size != 0:
+        raise ValueError(f"Sequence length {sequence_length} must be positive and divisible by CP size {cp_size}.")
+
+    cp_rank = cp_mesh.get_local_rank()
+    return torch.chunk(tensor, chunks=cp_size, dim=dim)[cp_rank].contiguous()
+
+
+def prepare_sequence_parallel_batch(
+    batch: BatchInput,
+    *,
+    device: torch.device,
+    device_mesh,
+    uses_mrope: bool = False,
+) -> PreparedSequenceParallelBatch:
+    """Pad the global language sequence while preserving encoder-owned layouts."""
+    model_inputs = {
+        key: value.to(device, non_blocking=True) for key, value in batch.items() if isinstance(value, torch.Tensor)
+    }
+    labels = model_inputs.pop("labels")
+    loss_weights = model_inputs.pop("loss_weights")
+
+    sequence_length = model_inputs["input_ids"].shape[-1]
+    cp_size = device_mesh["cp"].size()
+    pad_size = -sequence_length % cp_size
+    has_multimodal_inputs = bool(MULTIMODAL_ENCODER_INPUT_KEYS.intersection(model_inputs))
+    if uses_mrope and has_multimodal_inputs:
+        model_inputs.pop("position_ids", None)
+
+    # Only language tensors are padded; encoder tensors retain their original layouts.
+    for key in SEQUENCE_PARALLEL_INPUT_KEYS.intersection(model_inputs):
+        model_inputs[key] = F.pad(model_inputs[key], (0, pad_size), value=0)
+
+    shift_labels = F.pad(labels[..., 1:], (0, pad_size + 1), value=IGNORE_INDEX)
+    shift_loss_weights = F.pad(loss_weights[..., 1:], (0, pad_size + 1), value=0.0)
+
+    return PreparedSequenceParallelBatch(
+        model_inputs=model_inputs,
+        local_shift_labels=split_sequence_tensor(shift_labels, device_mesh),
+        local_shift_loss_weights=split_sequence_tensor(shift_loss_weights, device_mesh),
+        global_loss_weight_sum=shift_loss_weights.sum(),
+    )
diff --git a/src/llamafactory/v1/plugins/model_plugins/parallelization/gdn_attention.py b/src/llamafactory/v1/plugins/model_plugins/parallelization/gdn_attention.py
index 9f28249f5..4edb4056d 100644
--- a/src/llamafactory/v1/plugins/model_plugins/parallelization/gdn_attention.py
+++ b/src/llamafactory/v1/plugins/model_plugins/parallelization/gdn_attention.py
@@ -17,6 +17,7 @@ import torch
 import torch.distributed as dist
 import torch.nn.functional as F
 
+from ....utils import logging
 from .seq_comm import SeqAllToAll4D
 from .ulysses import (
     get_ulysses_sequence_parallel_group,
@@ -24,6 +25,9 @@ from .ulysses import (
 )
 
 
+logger = logging.get_logger(__name__)
+
+
 def is_gdn_layer(layer) -> bool:
     """Return True if the module is a GDN (linear attention) layer or a DecoderLayer containing one."""
     if hasattr(layer, "layer_type") and layer.layer_type == "linear_attention":
@@ -107,6 +111,7 @@ def gdn_forward_with_cp(self, hidden_states, attention_mask=None, **kwargs):
         global_position_ids = torch.cat(global_position_ids, dim=-1).contiguous()
         try:
             from transformers.modeling_flash_attention_utils import prepare_fa_kwargs_from_position_ids
+
             cu_seqlens = prepare_fa_kwargs_from_position_ids(global_position_ids)[0][0]
         except ImportError:
             cu_seqlens = None
@@ -248,3 +253,19 @@ def gdn_forward_with_cp(self, hidden_states, attention_mask=None, **kwargs):
     # Output projection in CP layout
     output = self.out_proj(norm_out)
     return output
+
+
+def apply_gdn_attention(model, cp_size: int) -> None:
+    """Install the sequence-parallel GDN forward on each unique linear-attention module."""
+    if cp_size > 1:
+        replaced_modules = set()
+        for name, module in model.named_modules():
+            if is_gdn_layer(module):
+                gdn_module = _get_gdn_module(module)
+                if id(gdn_module) in replaced_modules:
+                    continue
+                replaced_modules.add(id(gdn_module))
+                gdn_module.original_forward = gdn_module.forward
+                gdn_module.forward = gdn_forward_with_cp.__get__(gdn_module, type(gdn_module))
+                gdn_name = name if gdn_module is module else f"{name}.linear_attn"
+                logger.info_rank0(f"Replaced GDN forward in {gdn_name} with gdn_forward_with_cp for context parallel.")
diff --git a/src/llamafactory/v1/plugins/model_plugins/parallelization/hook.py b/src/llamafactory/v1/plugins/model_plugins/parallelization/hook.py
new file mode 100644
index 000000000..fff388dfa
--- /dev/null
+++ b/src/llamafactory/v1/plugins/model_plugins/parallelization/hook.py
@@ -0,0 +1,119 @@
+# Copyright 2026 the LlamaFactory team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+"""Common language-boundary hook for text-only and multimodal CP."""
+
+from __future__ import annotations
+
+from typing import TYPE_CHECKING, Any
+
+from torch import nn
+
+from ....accelerator.interface import Dim, DistributedInterface
+from ....utils import logging
+from .batch import MULTIMODAL_ENCODER_INPUT_KEYS, split_sequence_tensor
+
+
+if TYPE_CHECKING:
+    from ....utils.types import HFModel
+
+
+logger = logging.get_logger(__name__)
+
+_MULTIMODAL_ENCODER_NAMES = ("visual", "audio_tower")
+
+
+def _resolve_multimodal_boundary(model: HFModel) -> nn.Module | None:
+    cores = (model, getattr(model, "model", None))
+    for boundary_name in ("language_model", "model"):
+        for core in cores:
+            has_encoder = any(isinstance(getattr(core, name, None), nn.Module) for name in _MULTIMODAL_ENCODER_NAMES)
+            boundary = getattr(core, boundary_name, None)
+            if has_encoder and isinstance(boundary, nn.Module):
+                return boundary
+
+    return None
+
+
+def _split_deepstack_inputs(kwargs: dict[str, Any], device_mesh) -> None:
+    """Align optional DeepStack visual rows with the local language shard."""
+    visual_pos_masks = kwargs.get("visual_pos_masks")
+    if visual_pos_masks is None:
+        return
+
+    deepstack_visual_embeds = kwargs["deepstack_visual_embeds"]
+    visual_ordinals = visual_pos_masks.reshape(-1).long().cumsum(dim=0) - 1
+    visual_ordinals = visual_ordinals.view_as(visual_pos_masks)
+    local_visual_pos_masks = split_sequence_tensor(visual_pos_masks, device_mesh)
+    local_visual_ordinals = split_sequence_tensor(visual_ordinals, device_mesh)[local_visual_pos_masks]
+
+    kwargs["visual_pos_masks"] = local_visual_pos_masks
+    kwargs["deepstack_visual_embeds"] = [
+        visual_embeds.index_select(0, local_visual_ordinals.to(visual_embeds.device))
+        for visual_embeds in deepstack_visual_embeds
+    ]
+
+
+def install_sequence_parallel_hook(model: HFModel) -> None:
+    """Install the common CP split at the model's language boundary."""
+    get_base_model = getattr(model, "get_base_model", None)
+    if callable(get_base_model):
+        model = get_base_model()
+
+    boundary = _resolve_multimodal_boundary(model)
+    requires_fused_inputs = boundary is not None
+    if boundary is None:
+        boundary = model.base_model
+
+    device_mesh = DistributedInterface().get_device_mesh(Dim.CP)
+
+    def sequence_parallel_pre_hook(_module, args, kwargs):
+        encoder_inputs = {key for key in MULTIMODAL_ENCODER_INPUT_KEYS if kwargs.get(key) is not None}
+        if not requires_fused_inputs and encoder_inputs:
+            raise ValueError(
+                "Sequence parallelism reached a text language boundary with multimodal encoder inputs "
+                f"{sorted(encoder_inputs)}; this model structure is not supported."
+            )
+
+        input_ids = kwargs.get("input_ids")
+        inputs_embeds = kwargs.get("inputs_embeds")
+        if requires_fused_inputs and input_ids is not None:
+            raise ValueError(
+                "Multimodal sequence parallelism must enter the language boundary through fused "
+                "`inputs_embeds`; received non-null `input_ids`."
+            )
+
+        uses_inputs_embeds = inputs_embeds is not None
+        sequence_tensor = inputs_embeds if uses_inputs_embeds else input_ids
+        sequence_length = sequence_tensor.shape[1]
+
+        attention_mask = kwargs.get("attention_mask")
+
+        position_ids = kwargs["position_ids"]
+        if position_ids.shape[-1] != sequence_length:
+            raise ValueError("position_ids must match the global sequence length before CP splitting.")
+
+        _split_deepstack_inputs(kwargs, device_mesh)
+
+        sequence_name = "inputs_embeds" if uses_inputs_embeds else "input_ids"
+        kwargs[sequence_name] = split_sequence_tensor(sequence_tensor, device_mesh, dim=1)
+        if attention_mask is not None:
+            kwargs["attention_mask"] = split_sequence_tensor(attention_mask, device_mesh)
+        kwargs["position_ids"] = split_sequence_tensor(position_ids, device_mesh)
+
+        kwargs["use_cache"] = False
+        return args, kwargs
+
+    boundary.register_forward_pre_hook(sequence_parallel_pre_hook, with_kwargs=True)
+    logger.info_rank0("Installed sequence-parallel pre-hook at the language boundary.")
diff --git a/src/llamafactory/v1/plugins/model_plugins/parallelization/sequence_parallel.py b/src/llamafactory/v1/plugins/model_plugins/parallelization/sequence_parallel.py
index 517d9a7a4..fd2f53ef6 100644
--- a/src/llamafactory/v1/plugins/model_plugins/parallelization/sequence_parallel.py
+++ b/src/llamafactory/v1/plugins/model_plugins/parallelization/sequence_parallel.py
@@ -12,29 +12,16 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
-import sys
-from functools import partial
-
 import torch
 import torch.distributed as dist
 import torch.nn.functional as F
-import transformers
 
 from ....accelerator.interface import Dim, DistributedInterface
-from ....utils import logging
+from ....utils.constants import IGNORE_INDEX
 from ....utils.plugin import BasePlugin
-from ....utils.types import ModelOutput
-from .gdn_attention import _get_gdn_module, gdn_forward_with_cp, is_gdn_layer
-from .ulysses import (
-    UlyssesAttention,
-    get_ulysses_sequence_parallel_group,
-    get_ulysses_sequence_parallel_rank,
-    get_ulysses_sequence_parallel_world_size,
-    set_ulysses_sequence_parallel_group,
-)
-
-
-logger = logging.get_logger(__name__)
+from .batch import prepare_sequence_parallel_batch
+from .gdn_attention import apply_gdn_attention
+from .ulysses import apply_ulysses_attention
 
 
 class SequenceParallelModelPlugin(BasePlugin):
@@ -47,171 +34,48 @@ class SequenceParallelLossPlugin(BasePlugin):
         return super().__call__(model, inputs, *args, **kwargs)
 
 
-def new_flash_attn_forward(
-    query_states,
-    key_states,
-    value_states,
-    attention_mask,
-    sequence_parallel_size=1,
-    dropout=0,
-    deterministic=False,
-    is_causal=True,
-    group=None,
-    mode="ulysses",
-    attn_fn=None,
-    target_dtype=None,
-    **kwargs,
-):
-    if mode == "ulysses":
-        dist_attn = UlyssesAttention(sequence_process_group=group, attn_fn=attn_fn)
-        attn_output = dist_attn(
-            query_states,
-            key_states,
-            value_states,
-            attention_mask,
-            query_length=query_states.shape[1] * sequence_parallel_size,
-            deterministic=deterministic,
-            dropout_p=dropout,
-            causal=is_causal,
-            position_ids=kwargs.get("position_ids", None),
-            target_dtype=target_dtype,
-        )
-    else:
-        raise NotImplementedError("Other sequence parallel modes are to be implemented.")
-
-    return attn_output
-
-
 @SequenceParallelModelPlugin("ulysses").register()
 def apply_sequence_parallel(model, cp_size: int):
-    # Replace _flash_attention_forward with new_flash_attn_forward
-    module = sys.modules[model.__module__]
+    from .hook import install_sequence_parallel_hook
 
-    set_ulysses_sequence_parallel_group(DistributedInterface().get_group(Dim.CP))
-
-    try:
-        num_attention_heads, num_key_value_heads = (
-            model.config.num_attention_heads,
-            model.config.num_key_value_heads,
-        )
-    except AttributeError:
-        num_attention_heads, num_key_value_heads = (
-            model.config.text_config.num_attention_heads,
-            model.config.text_config.num_key_value_heads,
-        )
-
-    assert num_attention_heads % cp_size == 0, "num_attention_heads must be divisible by cp_size"
-    assert num_key_value_heads % cp_size == 0 or cp_size % num_key_value_heads == 0, (
-        "num_key_value_heads must be divisible by cp_size"
-    )
-
-    origin_attn = transformers.modeling_flash_attention_utils._flash_attention_forward
-    new_flash_attention_forward = partial(
-        new_flash_attn_forward,
-        group=get_ulysses_sequence_parallel_group(),
-        mode="ulysses",
-        attn_fn=origin_attn,
-        sequence_parallel_size=cp_size,
-    )
-
-    for module_name, module in list(sys.modules.items()):
-        try:
-            if (
-                hasattr(module, "__file__")
-                and "transformers" in module.__file__
-                and getattr(module._flash_attention_forward, "__name__", "") == "_flash_attention_forward"
-            ):
-                module._flash_attention_forward = new_flash_attention_forward
-                logger.info_rank0(
-                    f"Replaced _flash_attention_forward in module {module_name} with new_flash_attn_forward for sequence parallel."
-                )
-        except (AttributeError, TypeError):
-            continue
-
-    # Register GDN forward for CP support
-    if cp_size > 1:
-        replaced_modules = set()
-        for name, module in model.named_modules():
-            if is_gdn_layer(module):
-                gdn_module = _get_gdn_module(module)
-                if id(gdn_module) in replaced_modules:
-                    continue
-                replaced_modules.add(id(gdn_module))
-                gdn_module.original_forward = gdn_module.forward
-                gdn_module.forward = gdn_forward_with_cp.__get__(gdn_module, type(gdn_module))
-                gdn_name = name if gdn_module is module else f"{name}.linear_attn"
-                logger.info_rank0(f"Replaced GDN forward in {gdn_name} with gdn_forward_with_cp for context parallel.")
-
-
-def padding_and_split_data(data, device_mesh=None):
-    if device_mesh is not None:
-        cp_size = device_mesh["cp"].size()
-        cp_rank = device_mesh["cp"].get_local_rank()
-        cp_group = device_mesh["cp"].get_group()
-        for k, v in data.items():
-            if isinstance(v, torch.Tensor) and v.ndim > 1:
-                data_len = torch.tensor(v.shape[-1], device=v.device, dtype=torch.int64)
-                global_data_len = [torch.empty_like(data_len) for _ in range(cp_size)]
-                dist.all_gather(global_data_len, data_len, group=cp_group)
-                max_data_len = max(global_data_len)
-                pad_size = max_data_len - v.shape[-1] + (cp_size - max_data_len % cp_size) % cp_size
-                if k == "labels":
-                    pad_value = -100
-                elif k == "loss_weights":
-                    pad_value = 0.0
-                else:
-                    pad_value = 0
-                pad_data = F.pad(v, (0, pad_size), value=pad_value)
-                data[k] = torch.chunk(pad_data, chunks=cp_size, dim=-1)[cp_rank].contiguous()
-    return data
+    install_sequence_parallel_hook(model)
+    group = DistributedInterface().get_group(Dim.CP)
+    apply_ulysses_attention(model, cp_size, group)
+    apply_gdn_attention(model, cp_size)
 
 
 @SequenceParallelLossPlugin("sequence_parallel_loss").register()
-def sequence_parallel_loss(model, model_inputs):
+def sequence_parallel_loss(model, model_inputs, loss_fn=None, *, uses_mrope: bool = False):
+    """Prepare CP targets and aggregate weighted CE, optionally using a custom loss function.
+
+    ``loss_fn`` receives ``(model, model_inputs, labels, loss_weights)``. Labels
+    and weights are already shifted globally and sharded for the local CP rank.
+    It must return a differentiable FP32 scalar weighted loss sum, without
+    shifting targets again, normalizing, or performing CP collectives.
+    """
     device_mesh = DistributedInterface().get_device_mesh(Dim.CP)
 
-    model_inputs = {
-        k: v.to(dist.get_rank(), non_blocking=True) for k, v in model_inputs.items() if isinstance(v, torch.Tensor)
-    }
+    prepared = prepare_sequence_parallel_batch(
+        model_inputs,
+        device=DistributedInterface().current_device,
+        device_mesh=device_mesh,
+        uses_mrope=uses_mrope,
+    )
+    labels = prepared.local_shift_labels
+    loss_weights = prepared.local_shift_loss_weights
+    if loss_fn is None:
+        logits = model(**prepared.model_inputs).logits.float()
+        token_loss = F.cross_entropy(
+            logits.reshape(-1, logits.size(-1)), labels.reshape(-1), reduction="none", ignore_index=IGNORE_INDEX
+        )
+        local_numerator = (token_loss * loss_weights.reshape(-1)).sum()
+    else:
+        local_numerator = loss_fn(model, prepared.model_inputs, labels, loss_weights)
+    cp_group = device_mesh["cp"].get_group()
 
-    model_inputs = padding_and_split_data(model_inputs, device_mesh)
-
-    batch_size, _ = model_inputs["labels"].shape
-
-    outputs: ModelOutput = model(**model_inputs)
-
-    logits = outputs.logits.float()
-
-    labels = model_inputs["labels"]
-
-    cp_group = get_ulysses_sequence_parallel_group()
-    cp_world_size = get_ulysses_sequence_parallel_world_size(cp_group)
-    cp_rank = get_ulysses_sequence_parallel_rank(cp_group)
-
-    # use all_gather to collect labels from all sequence parallel processes
-    global_labels = [torch.empty_like(labels) for _ in range(cp_world_size)]
-    dist.all_gather(global_labels, labels, group=cp_group)
-    labels = torch.cat(global_labels, dim=1).contiguous()
-    shift_labels = labels[..., 1:].contiguous()
-    shift_labels = F.pad(shift_labels, (0, 1), value=-100)
-    shift_labels = torch.chunk(shift_labels, chunks=cp_world_size, dim=1)[cp_rank].contiguous()
-
-    # use all_gather to collect loss_weights from all sequence parallel processes
-    loss_weights = model_inputs["loss_weights"]
-    global_loss_weights = [torch.empty_like(loss_weights) for _ in range(cp_world_size)]
-    dist.all_gather(global_loss_weights, loss_weights, group=cp_group)
-    shift_loss_weights = torch.cat(global_loss_weights, dim=1).contiguous()
-    shift_loss_weights = shift_loss_weights[..., 1:].contiguous()
-
-    shift_logits = logits.view(-1, logits.size(-1)).contiguous()
-    shift_labels = shift_labels.view(-1).contiguous()
-
-    # use all_gather to collect log_probs from all sequence parallel processes
-    log_probs = -F.cross_entropy(shift_logits, shift_labels, reduction="none").view(batch_size, -1)
-    global_log_probs = dist.nn.all_gather(log_probs, group=cp_group)
-    global_log_probs = torch.cat(global_log_probs, dim=1).contiguous()
-    log_probs = global_log_probs[..., :-1].contiguous()
-
-    loss = (-log_probs * shift_loss_weights).sum() / (shift_loss_weights.sum() + 1e-6)
-
-    return loss
+    # Do not average local mean losses: CP shards can own different supervised-token weights.
+    # Gather the differentiable weighted numerators instead, reducing communication from
+    # [batch, local_sequence] log probabilities to one scalar per CP rank.
+    global_loss_numerators = dist.nn.all_gather(local_numerator.reshape(1), group=cp_group)
+    global_loss_numerator = torch.cat(global_loss_numerators).sum()
+    return global_loss_numerator / (prepared.global_loss_weight_sum + 1e-6)
diff --git a/src/llamafactory/v1/plugins/model_plugins/parallelization/ulysses.py b/src/llamafactory/v1/plugins/model_plugins/parallelization/ulysses.py
index 6ba744da9..3c8bfe9b2 100644
--- a/src/llamafactory/v1/plugins/model_plugins/parallelization/ulysses.py
+++ b/src/llamafactory/v1/plugins/model_plugins/parallelization/ulysses.py
@@ -15,16 +15,22 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+import sys
+from functools import partial
 from typing import Any, Optional
 
 import torch
 import torch.distributed as dist
+import transformers
 from torch import Tensor
 from torch.distributed import ProcessGroup
 
+from ....utils import logging
 from .seq_comm import SeqAllToAll4D
 
 
+logger = logging.get_logger(__name__)
+
 _ULYSSES_SEQUENCE_PARALLEL_GROUP = None
 
 
@@ -187,3 +193,95 @@ class UlyssesAttention(torch.nn.Module):
 
         # out e.g., [s/p::h]
         return output
+
+
+def new_flash_attn_forward(
+    query_states,
+    key_states,
+    value_states,
+    attention_mask,
+    sequence_parallel_size=1,
+    dropout=0,
+    deterministic=False,
+    is_causal=True,
+    group=None,
+    mode="ulysses",
+    attn_fn=None,
+    target_dtype=None,
+    **kwargs,
+):
+    """Route causal language attention through Ulysses and leave replicated encoders native."""
+    if mode == "ulysses":
+        if not is_causal:
+            return attn_fn(
+                query_states,
+                key_states,
+                value_states,
+                attention_mask,
+                is_causal=False,
+                dropout=dropout,
+                deterministic=deterministic,
+                target_dtype=target_dtype,
+                **kwargs,
+            )
+
+        dist_attn = UlyssesAttention(sequence_process_group=group, attn_fn=attn_fn)
+        attn_output = dist_attn(
+            query_states,
+            key_states,
+            value_states,
+            attention_mask,
+            query_length=query_states.shape[1] * sequence_parallel_size,
+            deterministic=deterministic,
+            dropout_p=dropout,
+            causal=is_causal,
+            position_ids=kwargs.get("position_ids", None),
+            target_dtype=target_dtype,
+        )
+    else:
+        raise NotImplementedError("Other sequence parallel modes are to be implemented.")
+
+    return attn_output
+
+
+def apply_ulysses_attention(model, cp_size: int, group: dist.ProcessGroup) -> None:
+    """Validate and install the Ulysses FlashAttention bridge for one process group."""
+    # Replace _flash_attention_forward with new_flash_attn_forward
+    set_ulysses_sequence_parallel_group(group)
+
+    try:
+        num_attention_heads, num_key_value_heads = (
+            model.config.num_attention_heads,
+            model.config.num_key_value_heads,
+        )
+    except AttributeError:
+        num_attention_heads, num_key_value_heads = (
+            model.config.text_config.num_attention_heads,
+            model.config.text_config.num_key_value_heads,
+        )
+
+    assert num_attention_heads % cp_size == 0, "num_attention_heads must be divisible by cp_size"
+    assert num_key_value_heads % cp_size == 0, "num_key_value_heads must be divisible by cp_size"
+
+    origin_attn = transformers.modeling_flash_attention_utils._flash_attention_forward
+    new_flash_attention_forward = partial(
+        new_flash_attn_forward,
+        group=get_ulysses_sequence_parallel_group(),
+        mode="ulysses",
+        attn_fn=origin_attn,
+        sequence_parallel_size=cp_size,
+    )
+
+    for module_name, module in list(sys.modules.items()):
+        try:
+            if (
+                hasattr(module, "__file__")
+                and "transformers" in module.__file__
+                and getattr(module._flash_attention_forward, "__name__", "") == "_flash_attention_forward"
+            ):
+                module._flash_attention_forward = new_flash_attention_forward
+                logger.info_rank0(
+                    f"Replaced _flash_attention_forward in module {module_name} with new_flash_attn_forward for sequence parallel."
+                )
+        except (AttributeError, TypeError):
+            continue
diff --git a/src/llamafactory/v1/trainers/dpo_trainer.py b/src/llamafactory/v1/trainers/dpo_trainer.py
index fb2dfb59d..b22512373 100644
--- a/src/llamafactory/v1/trainers/dpo_trainer.py
+++ b/src/llamafactory/v1/trainers/dpo_trainer.py
@@ -96,6 +96,8 @@ class DPOTrainer(BaseTrainer):
     ) -> None:
         if args.cp_size > 1:
             raise NotImplementedError("DPO trainer currently only supports cp_size == 1.")
+        if args.chunk_loss_size is not None:
+            raise NotImplementedError("Chunk Loss currently only supports SFT training.")
 
         self.pref_loss = args.pref_loss
         self.pref_beta = args.pref_beta
diff --git a/src/llamafactory/v1/trainers/rm_trainer.py b/src/llamafactory/v1/trainers/rm_trainer.py
index 78694d47b..2a32ae2c6 100644
--- a/src/llamafactory/v1/trainers/rm_trainer.py
+++ b/src/llamafactory/v1/trainers/rm_trainer.py
@@ -78,6 +78,8 @@ class RMTrainer(BaseTrainer):
     ) -> None:
         if args.cp_size > 1:
             raise NotImplementedError("RM trainer currently only supports cp_size == 1.")
+        if args.chunk_loss_size is not None:
+            raise NotImplementedError("Chunk Loss currently only supports SFT training.")
 
         super().__init__(args, model, renderer, train_dataset, callbacks)
 
diff --git a/src/llamafactory/v1/trainers/sft_trainer.py b/src/llamafactory/v1/trainers/sft_trainer.py
index d84263283..cc92bac04 100644
--- a/src/llamafactory/v1/trainers/sft_trainer.py
+++ b/src/llamafactory/v1/trainers/sft_trainer.py
@@ -14,15 +14,42 @@
 
 
 from ..accelerator.interface import DistributedInterface
-from ..config import InputArgument, get_args
+from ..config import InputArgument, TrainingArguments, get_args
 from ..core.base_trainer import BaseTrainer
 from ..core.data_engine import DataEngine
 from ..core.model_engine import ModelEngine
-from ..utils.types import BatchInput, Tensor
+from ..core.rendering import Renderer
+from ..utils.callbacks import TrainerCallback
+from ..utils.types import BatchInput, HFModel, Tensor, TorchDataset
 
 
 class SFTTrainer(BaseTrainer):
+    def __init__(
+        self,
+        args: TrainingArguments,
+        model: HFModel,
+        renderer: Renderer,
+        train_dataset: TorchDataset,
+        callbacks: list[TrainerCallback] | None = None,
+    ) -> None:
+        self._chunk_loss = None
+        if args.chunk_loss_size is not None:
+            from ..plugins.model_plugins.chunk_loss import LossPlugin
+
+            self._chunk_loss = LossPlugin("chunk_loss")(model, args.chunk_loss_size)
+
+        super().__init__(args, model, renderer, train_dataset, callbacks)
+
     def compute_loss(self, batch: BatchInput) -> Tensor:
+        if self.cp_size > 1:
+            from ..plugins.model_plugins.parallelization.sequence_parallel import SequenceParallelLossPlugin
+
+            return SequenceParallelLossPlugin("sequence_parallel_loss")(
+                self.model, batch, loss_fn=self._chunk_loss, uses_mrope=self._uses_mrope
+            )
+        if self._chunk_loss is not None:
+            return self._chunk_loss.compute_loss(self.model, batch, device=self.device, uses_mrope=self._uses_mrope)
+
         shift_loss_weights = batch["loss_weights"].to(self.device, non_blocking=True)[..., 1:]
         log_probs = self.compute_log_probs(self.model, batch)
         loss = (-log_probs * shift_loss_weights).sum() / (shift_loss_weights.sum() + 1e-6)
diff --git a/tests_v1/plugins/model_plugins/test_chunk_loss.py b/tests_v1/plugins/model_plugins/test_chunk_loss.py
new file mode 100644
index 000000000..b9a5736ea
--- /dev/null
+++ b/tests_v1/plugins/model_plugins/test_chunk_loss.py
@@ -0,0 +1,154 @@
+# Copyright 2026 the LlamaFactory team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from copy import deepcopy
+
+import pytest
+import torch
+import torch.distributed as dist
+import torch.nn.functional as F
+from torch import nn
+from torch.nn.parallel import DistributedDataParallel as DDP
+from transformers.modeling_outputs import CausalLMOutput
+
+from llamafactory.v1.plugins.model_plugins.chunk_loss import LossPlugin, _ChunkedLinearCrossEntropy
+from llamafactory.v1.trainers.sft_trainer import SFTTrainer
+from llamafactory.v1.utils.constants import IGNORE_INDEX
+from llamafactory.v1.utils.env import find_available_port
+from llamafactory.v1.utils.pytest import dist_env
+
+
+class _TinyCausalLM(nn.Module):
+    def __init__(self):
+        super().__init__()
+        self.embed_tokens = nn.Embedding(31, 16)
+        self.lm_head = nn.Linear(16, 31, bias=False)
+
+    def get_output_embeddings(self):
+        return self.lm_head
+
+    def forward(self, input_ids, **_):
+        return CausalLMOutput(logits=self.lm_head(self.embed_tokens(input_ids)))
+
+
+def _make_model():
+    return _TinyCausalLM()
+
+
+def _assert_gradients_close(actual: torch.Tensor, expected: torch.Tensor) -> None:
+    error = torch.linalg.vector_norm(actual.float() - expected.float())
+    reference = torch.linalg.vector_norm(expected.float())
+    assert error <= 2 * torch.finfo(expected.dtype).eps * reference
+
+
+def _weighted_cross_entropy(logits, labels, loss_weights):
+    losses = F.cross_entropy(logits.flatten(0, -2).float(), labels.flatten(), reduction="none")
+    return (losses * loss_weights.flatten()).sum()
+
+
+@pytest.mark.parametrize("frozen_head", [False, True])
+def test_chunk_loss_matches_eager_loss_and_gradients(frozen_head):
+    torch.manual_seed(0)
+    eager_head = nn.Linear(4, 7).to(torch.bfloat16)
+    eager_head.requires_grad_(not frozen_head)
+    chunk_head = deepcopy(eager_head)
+    eager_hidden = torch.randn(2, 5, 4, dtype=torch.bfloat16, requires_grad=True)
+    chunk_hidden = eager_hidden.detach().clone().requires_grad_()
+    labels = torch.tensor([[0, 1, IGNORE_INDEX, 3, 4], [5, 6, 0, 1, 2]])
+    loss_weights = torch.tensor([[0.0, 0.25, 1.0, 0.75, 1.0], [1.0, 0.5, 0.0, 0.25, 1.0]])
+
+    eager_loss = _weighted_cross_entropy(eager_head(eager_hidden), labels, loss_weights)
+    chunk_loss = _ChunkedLinearCrossEntropy.apply(
+        chunk_hidden, chunk_head.weight, chunk_head.bias, labels, loss_weights, 3
+    )
+    scale = 0.07 / (loss_weights.sum() + 1e-6)
+    (eager_loss * scale).backward()
+    (chunk_loss * scale).backward()
+
+    torch.testing.assert_close(chunk_loss, eager_loss)
+    _assert_gradients_close(chunk_hidden.grad, eager_hidden.grad)
+    for actual, expected in zip(chunk_head.parameters(), eager_head.parameters()):
+        if frozen_head:
+            assert actual.grad is None
+        else:
+            _assert_gradients_close(actual.grad, expected.grad)
+
+
+@pytest.mark.parametrize("zero_supervision", [False, True])
+def test_chunk_sft_loss_matches_reference(zero_supervision):
+    model = _make_model()
+    input_ids = torch.tensor([[1, 2, 3, 4, 5], [6, 7, 8, 9, 10]])
+    labels = input_ids.clone()
+    labels[0, 2] = IGNORE_INDEX
+    batch = {
+        "input_ids": input_ids,
+        "attention_mask": torch.ones_like(input_ids),
+        "position_ids": torch.arange(5).expand(2, -1),
+        "labels": labels,
+        "loss_weights": torch.tensor([[0.0, 0.25, 0.0, 1.0, 0.5], [0.0, 0.0, 0.75, 0.0, 1.0]]),
+    }
+    if zero_supervision:
+        batch["labels"].fill_(IGNORE_INDEX)
+        batch["loss_weights"].zero_()
+    original_batch = {key: value.clone() for key, value in batch.items()}
+
+    trainer = object.__new__(SFTTrainer)
+    trainer.model = model
+    trainer.device = torch.device("cpu")
+    trainer.cp_size = 1
+    trainer._uses_mrope = False
+    trainer._chunk_loss = None
+    eager_loss = trainer.compute_loss(batch)
+
+    chunk_model = deepcopy(model)
+    trainer.model = chunk_model
+    trainer._chunk_loss = LossPlugin("chunk_loss")(chunk_model, chunk_size=3)
+    chunk_loss = trainer.compute_loss(batch)
+
+    torch.testing.assert_close(chunk_loss, eager_loss)
+    for key in batch:
+        torch.testing.assert_close(batch[key], original_batch[key])
+    torch.testing.assert_close(chunk_model(input_ids=input_ids).logits, model(input_ids=input_ids).logits)
+
+
+@pytest.mark.skipif(not dist.is_available() or not dist.is_gloo_available(), reason="Requires the CPU Gloo backend.")
+def test_chunk_loss_preserves_ddp_output_backward_hooks():
+    torch.manual_seed(7)
+    eager_model = _make_model()
+    chunk_model = deepcopy(eager_model)
+    loss_fn = LossPlugin("chunk_loss")(chunk_model, chunk_size=2)
+    input_ids = torch.tensor([[1, 2, 3, 4, 5]])
+    model_inputs = {"input_ids": input_ids, "use_cache": False}
+    labels = torch.tensor([[2, 3, 4, 5, IGNORE_INDEX]])
+    loss_weights = torch.tensor([[0.0, 0.25, 1.0, 0.5, 0.0]])
+    outer_scale = 0.3 / loss_weights.sum()
+    outer_outputs = []
+
+    def capture_outer_output(_model, _args, output):
+        outer_outputs.append(output.logits)
+
+    with dist_env(master_port=find_available_port()):
+        dist.init_process_group("gloo")
+        wrapped_model = DDP(chunk_model, find_unused_parameters=True)
+        wrapped_model.register_forward_hook(capture_outer_output)
+        eager_loss = _weighted_cross_entropy(eager_model(**model_inputs).logits, labels, loss_weights)
+        chunk_loss = loss_fn(wrapped_model, model_inputs, labels, loss_weights)
+
+        assert loss_fn._active_state is None
+        assert chunk_loss is outer_outputs.pop()
+        torch.testing.assert_close(chunk_loss, eager_loss)
+        (eager_loss * outer_scale).backward()
+        (chunk_loss * outer_scale).backward()
+        for expected, actual in zip(eager_model.parameters(), chunk_model.parameters(), strict=True):
+            torch.testing.assert_close(actual.grad, expected.grad)
diff --git a/tests_v1/plugins/model_plugins/test_ulysses_cp.py b/tests_v1/plugins/model_plugins/test_ulysses_cp.py
index e16286266..4d4fcb79f 100644
--- a/tests_v1/plugins/model_plugins/test_ulysses_cp.py
+++ b/tests_v1/plugins/model_plugins/test_ulysses_cp.py
@@ -12,19 +12,25 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+from types import SimpleNamespace
+
 import pytest
 import torch
 import torch.multiprocessing as mp
+from torch import nn
 
+import llamafactory.v1.plugins.model_plugins.parallelization.hook as hook_module
 from llamafactory.v1.accelerator.interface import DistributedInterface
 from llamafactory.v1.config.model_args import ModelArguments
 from llamafactory.v1.config.training_args import TrainingArguments
 from llamafactory.v1.core.model_engine import ModelEngine
 from llamafactory.v1.plugins.model_plugins.parallelization import ulysses
+from llamafactory.v1.plugins.model_plugins.parallelization.batch import prepare_sequence_parallel_batch
 from llamafactory.v1.plugins.model_plugins.parallelization.sequence_parallel import (
     SequenceParallelModelPlugin,
     sequence_parallel_loss,
 )
+from llamafactory.v1.utils.constants import IGNORE_INDEX
 from llamafactory.v1.utils.env import find_available_port
 from llamafactory.v1.utils.pytest import dist_env
 
@@ -99,3 +105,102 @@ def test_sequence_parallel_loss(cp_size, dp_size, batch_size):
     mp.spawn(
         _test_sequence_parallel_loss, args=(world_size, master_port, cp_size, dp_size, batch_size), nprocs=world_size
     )
+
+
+def test_non_causal_multimodal_encoder_attention_bypasses_ulysses():
+    captured_is_causal = None
+
+    def fake_native_attention(query, _key, _value, _attention_mask, **kwargs):
+        nonlocal captured_is_causal
+        captured_is_causal = kwargs["is_causal"]
+        return query + 1
+
+    query = torch.zeros(1, 4, 2, 8)
+    output = ulysses.new_flash_attn_forward(query, query, query, None, is_causal=False, attn_fn=fake_native_attention)
+
+    torch.testing.assert_close(output, query + 1)
+    assert captured_is_causal is False
+
+
+def _device_mesh(rank=0, size=2):
+    return {"cp": SimpleNamespace(size=lambda: size, get_local_rank=lambda: rank)}
+
+
+class _RecordingLanguageModel(nn.Module):
+    def forward(self, **kwargs):
+        return kwargs
+
+
+def test_multimodal_sequence_parallel_hook(monkeypatch):
+    # One shard gets non-contiguous visual rows while the next shard is empty.
+    cp_rank = [1]
+    device_mesh = {"cp": SimpleNamespace(size=lambda: 3, get_local_rank=lambda: cp_rank[0])}
+    distributed = SimpleNamespace(get_device_mesh=lambda _dim: device_mesh)
+    monkeypatch.setattr(hook_module, "DistributedInterface", lambda: distributed)
+
+    model = nn.Module()
+    model.model = core = nn.Module()
+    boundary = _RecordingLanguageModel()
+    core.visual = nn.Identity()
+    core.language_model = boundary
+    hook_module.install_sequence_parallel_hook(SimpleNamespace(get_base_model=lambda: model))
+
+    fused_inputs = torch.arange(24, dtype=torch.float32).view(2, 6, 2)
+    attention_mask = torch.tensor([[1, 1, 1, 1, 1, 0], [1, 1, 1, 1, 0, 0]])
+    position_ids = torch.arange(36).view(3, 2, 6)
+    visual_mask = torch.tensor([[True, False, False, True, False, False], [True, True, True, False, False, False]])
+    visual_embeds = torch.arange(10, dtype=torch.float32).view(5, 2).requires_grad_()
+    model_inputs = {
+        "input_ids": None,
+        "inputs_embeds": fused_inputs,
+        "attention_mask": attention_mask,
+        "position_ids": position_ids,
+        "visual_pos_masks": visual_mask,
+        "deepstack_visual_embeds": [visual_embeds],
+    }
+
+    outputs = boundary(**model_inputs)
+    torch.testing.assert_close(outputs["inputs_embeds"], fused_inputs[:, 2:4])
+    torch.testing.assert_close(outputs["attention_mask"], attention_mask[:, 2:4])
+    torch.testing.assert_close(outputs["position_ids"], position_ids[..., 2:4])
+    torch.testing.assert_close(outputs["visual_pos_masks"], visual_mask[:, 2:4])
+    torch.testing.assert_close(outputs["deepstack_visual_embeds"][0], visual_embeds[[1, 4]])
+    assert outputs["use_cache"] is False
+
+    outputs["deepstack_visual_embeds"][0].sum().backward()
+    expected_grad = torch.zeros_like(visual_embeds)
+    expected_grad[[1, 4]] = 1
+    torch.testing.assert_close(visual_embeds.grad, expected_grad)
+
+    cp_rank[0] = 2
+    visual_embeds.grad = None
+    empty_visual_embeds = boundary(**model_inputs)["deepstack_visual_embeds"][0]
+    assert empty_visual_embeds.shape == (0, 2)
+    empty_visual_embeds.sum().backward()
+    torch.testing.assert_close(visual_embeds.grad, torch.zeros_like(visual_embeds))
+
+
+def test_prepare_multimodal_sequence_parallel_batch_preserves_encoder_inputs_and_shifts_targets():
+    pixel_values = torch.arange(12, dtype=torch.float32).view(3, 4)
+    batch = {
+        "input_ids": torch.tensor([[1, 2, 3]]),
+        "attention_mask": torch.ones(1, 3, dtype=torch.long),
+        "position_ids": torch.tensor([[0, 1, 2]]),
+        "mm_token_type_ids": torch.tensor([[0, 1, 1]]),
+        "labels": torch.tensor([[1, 2, 3]]),
+        "loss_weights": torch.tensor([[9.0, 0.5, 2.0]]),
+        "pixel_values": pixel_values,
+    }
+    for rank in range(2):
+        prepared = prepare_sequence_parallel_batch(
+            batch, device=torch.device("cpu"), device_mesh=_device_mesh(rank), uses_mrope=True
+        )
+        assert prepared.model_inputs["input_ids"].tolist() == [[1, 2, 3, 0]]
+        assert prepared.model_inputs["mm_token_type_ids"].tolist() == [[0, 1, 1, 0]]
+        assert "labels" not in prepared.model_inputs and "loss_weights" not in prepared.model_inputs
+        assert "position_ids" not in prepared.model_inputs
+        assert prepared.model_inputs["attention_mask"].tolist() == [[1, 1, 1, 0]]
+        torch.testing.assert_close(prepared.model_inputs["pixel_values"], pixel_values)
+        assert prepared.local_shift_labels.tolist() == ([[2, 3]] if rank == 0 else [[IGNORE_INDEX, IGNORE_INDEX]])
+        assert prepared.local_shift_loss_weights.tolist() == ([[0.5, 2.0]] if rank == 0 else [[0.0, 0.0]])
+        assert prepared.global_loss_weight_sum.item() == 2.5